All publications from TCM
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T.Arcangeli, T. Skrbic, S. Azote, D. Marcato, A. Rosa, J.R. Banavar, R. Piazza, A. Maritan and A. Giacometti
Phase behaviour and self-assembly of semiflexible polymers in poor-solvent solutions
Macromolecules 57, 8940-8955 (2024)
doi: 10.1021/acs.macromol.4c01111
[arxiv]
C.J. Dongmo, T. Arcangeli, T. Skrbic, and A. Giacometti
Solvent Quality and Nonbiological Oligomer Folding: Revisiting Conventional Paradigms
Soft Matter 20, 6507-6527 (2024)
doi:10.1039/d4sm00727a
[arxiv]
D. Marcato, A. Giacometti, A. Maritan, and A. Rosa
Theory of polymers in binary solvent solutions: Mean-field solution and phase behaviour
Phys. Rev. Materials 8, 125601-1/125601/11 (2024)
doi: 10.1103/PhysRevMaterials.8.125601
[arxiv]
M.G. Izzo, J. Russo, and G. Pastore,
The interplay between liquid-liquid ferroelectric phase transitions in supercooled water
Proc. Natl. Acad. Sci. U.S.A. 121 (47) e2412456121 (2024) doi: 10.1073/pnas.2412456121 [arxiv]
J.A. Wood, L. Dal Compare, L. Pearse, A. Schuitemaker, Y. Liu, T. Hudson, A. Giacometti, and A. Widmer-Cooper
Self-Assembly and Phase Behavior of Janus Rods: Competition Between Shape and Potential Anisotropy
J. Chem. Phys. 161, 184906-1/184906-11 (2024)
doi::10.1063/5.0241090
T. Skrbic, A. Giacometti, T.X. Hoang, A. Maritan, and J.R. Banavar
Geometrical framework for thinking about globular proteins: Turns in proteins
Proteins 92, 1-18 (2024)
[arxiv]
T. Skrbic, A. Giacometti, T.X. Hoang, A. Maritan, and J.R. Banavar
A Tale of Two Chains: Geometries of a Chain Model and Protein Native State Structures
Polymers 16 502 (2024)
[arxiv]
G. Tsekenis, G. Cimini, M. Kalafatis, A. Giacometti, T. Gilli, and G. Caldarelli
Network topology mapping of Chemical Compounds Space
Scientific Report 14, 5266 (2024)
doi:10.1038/s41598-024-54594-9
[arxiv]
A.Giacometti
Can Life Exist Without Water? A Data Driven Approach
Cortesi, A. (eds) Space Data Management. Studies in Big Data, vol 141. Springer, Singapore. https://doi.org/10.1007/978-981-97-0041-7_6
L.Tubiana, G.P.Alexander, A.Barbensi, D.Buck, J.H.E.Cartwright, M. Chwastyk, M.Cieplak, I. Coluzza, S. Copar, D.J.Craik, M.DiStefano, R.Everaers, P.F.N.Faisca, F. Ferrari, A. Giacometti, D.Goundaroulis, E. Haglund, Y.M.Hou, N. Ilieva, S.E.Jackson, A. Japaridze, N. Kaplan, A.R. Klotz, H. Li, C.N.Likos, E.Locatelli, T. Lopez-Leon,T. Machon, C. Micheletti, D. Micheletto, A. Niemi, W. Niemyska, S. Niewieczerzal, F. Nitti, E. Orlandini, S. Pasquali, A.P.Pierlinska, R. Podgornik, R. Potestio, N.M. Pugno, M. Ravnik, R.Ricca, C.M.Rohwer, A.Rosa, J.Smrek, A. Souslov, A.Stasiak, D. Steer, J. Sulkowska, P. Sulkowski, D.W.L.Sumners, C. Svanoborg, P.Szymczak, T. Tarenzi, R.Travasso, P.Virnau, D.Vlassopulos, P.Ziheri, S.Zumer
Topology in soft and biological matter
Physics Report 1075 1-137 (2024)
doi:10.1016/j.physrep.2024.04.002
[arxiv]
S. Francini, G. Chirici, L. Chiesi, P. Costa, G. Caldarelli, S. Mancuso
Global spatial assessment of potential for new peri-urban forests to combat climate change
Nature Cities 1, 286–294 (2024)
R. Mastrandrea, G. Antuofermo, M. Ovadek, T. Y.-C. Yeung, A. Dyevre and G. Caldarelli
Coalitions in international litigation: a network perspective
Phylosophical Transaction A Royal Society https://doi.org/10.1098/rsta.2023.0158 (2024).
P. Villegas, T. Gili, G. Caldarelli, A. Gabrielli
Evidence of scale-free clusters of vegetation in tropical rainforests
Physical Review E 109, L042402 (2024).
C.J. Dongmo, A. Giacometti
Solvent quality and solvent polarity in polypeptides
Phys. Chem. Chem. Phys. 25 4839-4853 (2023)
[arxiv]
J.R. Banavar, A. Giacometti, T.X.Hoang, A. Maritan and T.Skrbic
A geometrical framework for thinking about proteins
Proteins 91 1-15 (2023)
doi: 10.1002/prot.26567
[arxiv]
T. Skrbic, A. Giacometti, T.X. Hoang, A. Maritan, and J.R. Banavar
Geometrical framework for thinking about globular proteins: the power of pocking
Proteins 91 1-16 (2023)
[arxiv]
L. Dal Compare, F. Romano, J.A.Wood, A. Widmer-Cooper, and A. Giacometti
Janus helices: From fully attractive to hard helices
J. Chem. Phys. 159 174905-1 174905-16 (2023)
[arxiv]
A. Spano’, L. Fanton, D. Pizzolato, J. Moi, F. Vinci, A. Pesce, C.J.Dongmo, A. Giacometti, and M. Simeoni
RINmaker: a fast, versatile and reliable tool to determine residue interaction networks in proteins
BMC Bioinformatics 24 336 (2023)
doi:10.1186/s12859-023-05466-y
[arxiv]
D. Marcato, A. Giacometti, A. Maritan, A. Rosa
Phase behavior of semiflexible lattice polymers in poor-solvent solutions: mean-field theory and Monte Carlo simulations
J. Chem. Phys. 159, 154901-1/154901-17 (2023)
[arxiv]
M. Mannone, V. Seidita, A. Chella, A. Giacometti, and P. Fazio
Energy and SNR-Award Robotic Swarm Coordination for Aquatic Cleaning Operation
IEEE 97th Vehicular Technology Conference (VTC2023-Spring), Florence, Italy 1-7 (2023)
doi:10.1109/VTC2023-Spring57618.2023.10200327
G Ricciardi, G Montagna, G Caldarelli, G Cimini
Dimensional reduction of solvency contagion dynamics on financial networks
Physica A: Statistical Mechanics and its Applications 630, 129287 (2023).
M Hu, G Caldarelli, T Gili
Inflammatory bowel disease biomarkers revealed by the human gut microbiome network
Scientific Reports 13, 19428 (2023).
L Klinčić, V Zlatić, G Caldarelli, H Štefančić
Systemic risk measured by systems resiliency to initial shocks
Physical Review E 108, 044303 (2023).
G. Caldarelli, E. Arcaute, M. Barthelemy, M. Batty, C. Gershenson, D. Helbing, S. Mancuso, Y. Moreno,
J. J. Ramasco, C. Rozenblat, A. Sánchez & J. L. Fernández-Villacañas
The role of complexity for Digital Twins of Cities
Nature Computational Science 3, 374–381 (2023).
P. Villegas Gongora, T. Gili, G. Caldarelli, A. Gabrielli,
Laplacian Renormalization group for heterogeneous networks
Nature Physics 19 445-450 (2023).
G. Fischetti, N. Schmid, S. Bruderer, G. Caldarelli, A. Scarso, A. Henrici, D. Wilhelm
Automatic Classification of signal regions in 1H Nuclear Magnetic Resonance Spectra
Frontiers Artificial Intelligence 5, 1116416 (2023).
G. Moro, C.J. Dongmo Foumthuim, M. Spinaci, E. Martini, D. Cimino, E. Baliana, P. Liberzeit, F. Romano, A. Giacometti, R. Campos, K. De Wael and L.M. Moretto
How perfluoroalkyl substances modify fluorinated self-assembled monolayer architectures: an electrochemical and computational study Analytical Chimica Acta 1204, 339740 (2022)
https://doi.org/10.1016/j.aca.2022.339740
[arxiv]
T. Skrbic, T.X. Hoang, A. Giacometti, A. Maritan, J.R. Banavar
Proteins — a celebration of consilience
International Journal of Modern Physics B 35 2140051-1/2140051-15 (2022)
doi: 10.1142/S0217979221400518
[arxiv]
Y. Liu, J. Wood, A. Giacometti, A. Widmer-Cooper
The thermodynamic origin of chiral twist in monolayer assemblies of rod-like colloids
Nanoscale 14, 16837-16844 (2022)
[arxiv]
P. Villegas Gongora, A. Gabrielli, F. Santucci, G. Caldarelli, T. Gili
Laplacian paths in complex networks: Information core emerges from entropic transitions
Physical Review Research 4 033196 (2022).
M.Mattei, M. Pratelli, G. Caldarelli, M. Petrocchi, F. Saracco
Bow-tie structures of twitter discursive communities
Sci. Rep. 12, 12944 (2022).
P. Villegas Gongora, T. Gili, A. Gabrielli, G. Caldarelli
Characterising spatial point processes by percolation transition
J. Stat. Mech. 073202 (2022).
P. Auconi, T. Gili, S. Capuani, M. Saccucci, G. Caldarelli, A. Polimeni, G. Di Carlo
The validity of Machine learning procedures in Orthodontics: what is still missing?
J. Pers. Med. 12, 957 (2022).
E. Marchese, G. Caldarelli, T. Squartini
Detecting mesoscale structures by surprise
Communications Physics 5, 132(2022).
V. Macchiati, G. Brandi, G. Cimini, G. Caldarelli, D. Paolotti, T. Di Matteo
Systemic liquidity contagion in the European interbank market
Journal of Economic Interaction and Coordination 17, 443–474 (2022).
T. Skrbic, A. Maritan, A. Giacometti, and J.R. Banavar
Local sequence-structure relationship in proteins
Protein Science 30 818-829 (2021)
https://doi.org/10.1002/pro.4032
[arxiv]
J.T. Lopes, F. Romano, E. Grelet, L.F.M. Franco, and A. Giacometti
Phase behaviour of hard cylinders
J. Chem. Phys. 154, 104902-1/104902-12 (2021)
https://doi.org/10.1063/5.0040942
[arxiv]
T. Skrbic, T.X. Hoang, A. Giacometti, A. Maritan and J.R. Banavar
Marginally compact phase and ordered ground states in a model polymer with side spheres
Physical Review E 104 L012501-1/L012501-7 (2021)
doi: https://doi.org/10.1103/PhysRevE.104.L012501
[arxiv]
T. Skrbic, T.X. Hoang, A. Giacometti, A. Maritan and J.R. Banavar
Spontaneous dimensional reduction and novel ground state degeneracy in a simple chain model
Physical Review E 104 L012101-1/L012101-7 (2021)
doi: 10.1103/PhysRevE.104.L012102
[arxiv]
T. Skrbic, A. Maritan, A. Giacometti, G. Rose and J.R. Banavar
Building blocks of protein structures: Physics meets Biology
Physical Review E 104 014402-1/014402-7 (2021)
doi: 10.1103/PhysRevE.104.014402
[arxiv]
Z. Zhou, M. Serafino, L. Cohan, G. Caldarelli, H. Makse
Why polls fail to predict elections
Journal of Big Data 8, 137 (2021).
T. Gili, G. Di Carlo, S. Capuani, P. Auconi, G. Caldarelli, A. Polimeni
Complexity and data mining in dental research: a network medicine perspective on interceptive orthodontics
Orthodontics and Craniofacials Resarch 24, 16-25 (2021).
P. Villegas, T. Gili, G. Caldarelli
Emergent spatial patterns of coexistence in species-rich plant communities
PRE, 104, 034305 (2021).
M. Mattei, G. Caldarelli, T. Squartini, F. Saracco
Italian Twitter semantic network during the Covid-19 epidemic
EPJ DATA 10, 47 (2021).
R. Mastrandrea, F. Piras, A. Gabrielli, G. Caldarelli, G. Spalletta, T. Gili
The unbalanced reorganization of weaker functional connections induces the altered brain network topology in schizophrenia
Scientific Reports 11, 15400 (2021).
A. Patuelli, F. Saracco, N. Lattanzi, G. Caldarelli
Firms’ Challenges and Social Responsibilities during Covid-19: a Twitter Analysis
PLOS One 16, e0254748 (2021).
G. Caldarelli, R. de Nicola, M. Petrocchi, M. Pratesi, F. Saracco
Flow of online misinformation during the peak of the COVID-19 pandemics in Italy
EPJ DATA 10, 34 (2021).
M. Bardoscia, P. Barucca, S. Battiston, F. Caccioli, G. Cimini, D. Garlaschelli, F. Saracco, T. Squartini, G. Caldarelli
Physics of Financial Networks,
Nature Reviews Physics 3, 490-507 (2021).
G. Di Carlo, T. Gili, G. Caldarelli, A. Polimeni, P. Cattaneo
A community detection analysis of malocclusion classes from orthodontics and upper airway data
Orthodontics and Craniofacial Research https://doi.org/10.1111/ocr.12490 (2021).
S.M. Krause, H. Štefančić, V. Zlatić, G. Caldarelli
Controlling systemic risk – network structures that minimize it and node properties to calculate it
PRE 103, 042304 (2021).
G. Benelli, E. Buscarini, C. Canetta, G. La Piana, G. Merli, A. Scartabellati, G. Viganò, R. Sfogliarini, G. Melilli, R. Assandri, D. Cazzato, D. S. Rossi, S. Usai, G. Caldarelli, I. Tramacere, G. Pellegata, G. P. Lauria
SARS-CoV-2 comorbidity network and outcome in hospitalised patients in Crema Italy
PLOS One, 16, e0248498 (2021).
M. Serafino, G. Cimini, A. Maritan, S. Suweis, J. R. Banavar, A. Rinaldo, G. Caldarelli
True scale-free networks hidden by finite-size effects
PNAS 118, e2013825118 (2021).
A. Facchini, R Mele, G. Caldarelli.
The Urban Metabolism of Lima: Perspectives and Policy Indications for GHG Emission Reduction
Frontiers in Sustainable Cities 2, 40 (2021).
D. Boso, T. Braga, S. Ravasini, T. Skrbic, A. Puglisi, O. Pinato, A. Chillon, M.C. Frare, and A. Giacometti
An integrated DEM-FEM approach to study breakage in packing of glass cartridges on a conveyor belt
Granular Matter 22 1-16 (2020)
https://doi.org/10.1007/s10035-020-01030-0
[arxiv]
M. Carrer, T. Skrbic, S.L. Bore, G. Milano, M. Cascella, and A. Giacometti
Can polarity-inverted surfactants self-assemble in nonpolar solvents?
J. Phys. Chem. B 124, 6448-6458 (2020)
https://doi.org/10.1021/acs.jpcb.0c04842
[arxiv]
C.J. Dongmo, M. Carrer, M. Houvet, T. Skrbic, G. Graziano, and A. Giacometti
Can the roles of polar and non-polar moieties be reversed in non-polar solvents?
Phys. Chem. Chem. Phys. 22, 25848-25858 (2020)
https://doi.org/10.1039/D0CP02948C
[arxiv]
A. Toffano, G. Chiarot, S. Zamuner, M. Marchi, E. Salvi, S.G. Waxman, C.G. Faber, G. Lauria, A. Giacometti, and M. Simeoni
Computational pipeline to probe NaV1.7 gain-of-function variants in neurophatic painful syndromes
Scientific Report 10, 17390 (2020)
https://doi.org/10.1038/s41598-020-74591-y
[arxiv]
P. Vernocchi, T. Gili, F. Conte, F Del Chierico, G. Conta, A. Miccheli, A Botticelli, P. Paci, G. Caldarelli, M. Nuti, P. Marchetti, L Putignani
Network Analysis of Gut Microbiome and Metabolome to Discover Microbiota-Linked Biomarkers in Patients affected by non-small cell lung cancer
International J. of Molecular Sciences, 21, 8730 (2020).
D. Delpini, S. Battiston, G. Caldarelli, M. Riccaboni
Portfolio diversification, differentiation and the robustness of holding Networks,
Applied Network Science, 5 37 (2020).
P. Barucca, M. Bardoscia, M. D’Errico, G. Visentin, G. Caldarelli, S. Battiston
Network valuation in Financial Systems
Mathematical Finance 30 1181-1204 (2020).
M. Bruno, F. Saracco, D. Garlaschelli, C.J. Tessone, G. Caldarelli
The ambiguity of nestedness under soft and hard constraints
Scientific Reports 10, 19903 (2020).
G. Caldarelli
Perspective on Complexity and Networks Science
J. Phys. Complex. 1 021001 (2020).
G. Caldarelli, R. De Nicola, F. Del Vigna, M. Petrocchi, F. Saracco
The role of bot squads in the political propaganda on Twitter
Communication Physics 3, 81 (2020).
G. Andrienko, N. Andrienko, C. Boldrini, G. Caldarelli, P. Cintia, S. Cresci, A. Facchini, F. Giannotti, A. Gionis, R. Guidotti, M. Mathioudakis, C. I. Muntean, L. Pappalardo, D. Pedreschi, E. Pournaras, F. Pratesi, M. Tesconi, R. Trasarti
(So) Big Data and the transformation of the city
International Journal of Data Science and Analytics (2020).
G. Caldarelli,
Review to the “Introduction of the Theory of Complex Systems”
Journal of Complex Networks 5, https://doi.org/10.1093/comnet/cnz038 (2020)